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M E N U

H O M E
L I N K S

Conserving Mississippi’s Freshwater Biodiversity
Matthew B. Hicks
The Nature Conservancy, Mississippi Chapter
6400 Lakeover Road, Suite C, Jackson, Mississippi 39213.
Abstract
The southeastern United States harbors a rich diversity of freshwater species and ecosystems. In
particular, Mississippi contains a spectacular diversity of aquatic plants and animals throughout its
many watersheds, from coastal black water systems to lower Appalachian Tennessee River systems.
Certain incompatible human uses of Mississippi's natural resources pose potential threats to this
natural heritage, and many entities, including non-profit organizations, governmental agencies, local
community groups and private sector companies are increasing their efforts to protect water quality,
quantity and biodiversity within the State. Limited resources, however, require their efforts be
carefully planned and focused to increase the probability of successful conservation and thus have
a positive impact on aquatic natural resources. The Nature Conservancy (TNC) has been active in
biological conservation of Mississippi’s natural resources for many decades. In recent years, the
Mississippi (MS) Chapter of TNC has focused resources and efforts on protecting and restoring the
biodiversity of Mississippi’s freshwater ecosystems. Through a process called Conservation by
Design, freshwater conservation areas of biodiversity significance have been identified and
prioritized and the development of plans to conserve and or protect these areas is underway. The
next steps for the MS chapter of TNC will be to implement these conservation plans, measure the
success of our conservation efforts and continue to revise the conservation plans as data and
information become available. A major factor in the success of our conservation efforts will rely
upon how well the community is engaged in the process, partnering with local, state and federal
government agencies, using scientific data as the foundation of the process and obtaining adequate
funding for the planning and implementation of the conservation strategies.
Key Words
freshwater conservation, freshwater biodiversity, conservation planning
Introduction
The Nature Conservancy (TNC) is a non-profit organization whose mission is to preserve the
plants, animals and natural communities that represent the diversity of life on Earth by protecting
the lands and waters they need to survive. The conservation goal of TNC is the long-term
survival of all representative types of viable native biological species and communities. The
Mississippi Chapter of the Nature Conservancy was established in 1989, however the Nature
Conservancy has been actively engaged in conservation in Mississippi since the 1970’s, mainly
through land acquisition. The Nature Conservancy also helped to establish the Mississippi
Natural Heritage Program in 1976, which identifies the state's most significant natural areas
through a comprehensive inventory of rare plant and animal species, exemplary natural
communities, special geological features, and significant natural areas.

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The importance of preserving biodiversity has been documented extensively (Wilson 1992,
Norton 1988, McNeely et al. 1990, Ehrlich and Ehrlich 1981, Myers 1992 and Plotkin 1988) and
includes major benefits such as: maintaining ecosystem integrity, water recycling and
purification, aiding plant pollination, generating and maintaining productive soils, production of
foods and medicines, providing biological pest control, offering recreation, assisting in the
bioremediation of chemical pollutants and advancing biotechnology. Annual U.S. economic
benefits of biodiversity are estimated at 300 billion dollars (Pimental et al. 1997). This does not
take into account the many benefits that have not yet been discovered.
Historically, much of TNC’s focus has been on the conservation and protection of terrestrial
biodiversity. In recent years, however, TNC has committed to focusing resources and efforts to
the preservation and conservation of aquatic ecosystems, both freshwater and marine.
Freshwater biodiversity in the United States is known to be rich and diverse and a large portion
of the world’s freshwater species occur in the U.S. (Master et al. 1998) (Table 1). Further, the
southeastern United States is remarkably rich in aquatic species (Table 2).
Table 1. Global Significance of U.S. Freshwater Species
Taxonomic Group
Percentage of Known Species Worldwide Found in U.S.
Fishes
10
Crayfishes
61
Freshwater Mussels
30
Freshwater Snails
15
Stoneflies
40
Mayflies
30
Caddisflies
13
Dragonflies and Damselflies
8
Table 2. Significance of Southeastern U.S. Freshwater Species
Taxonomic Group
Percentage of U.S. Species
Found in Southeast
Percentage of North American
Species Found in Southeast
Fishes
62
Crayfishes
90
Freshwater Mussels
91
Freshwater Snails
61
Stoneflies
32
Mayflies
39
Caddisflies
40
Dragonflies and Damselflies
48

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It has the richest fish diversity (686 species) and highest number of endemic fishes in North
America north of Mexico (Warren et. al. 2000). Ninety-one percent (269 of 297) of all mussels
in the United States occur in the southeast (Neves et. al. 1997). There are 313 species of
freshwater snails in this region, 61% of the U.S. total. Estimates show that freshwater
crustaceans, including both cave and surface dwellers, are the most diverse in the U.S. (Hobbs
1992).
This diverse assemblage of species, occurring in freshwater ecosystems of the southeastern U.S.
is highly imperiled. Almost 50% of the most imperiled freshwater regions in the U. S. occur in
the southeast (Master et. al. 1998). Sixty percent of mussels and 28% of fishes are in jeopardy.
In the southeast, the aquatic fauna has experienced one of the highest rates of extinction in the
continental U.S. (Warren et. al. 2000). This is especially true for the freshwater snails and
mussels, with 38 and 36 species known to be extinct.
There are many stresses and sources of stress, together called “threats”, affecting aquatic
communities and species in the southeast. In most freshwater ecosystems, there are several
stresses acting on the community simultaneously, resulting in degradation of the ecological
integrity and ultimately the extinction of species. Of the many stresses that exist, TNC has
identified three major stresses:
¬ In-stream habitat and hydrologic alteration
¬ Water quality pollutants (mainly sedimentation, organic enrichment and nutrification)
¬ Predation and competition from invasive species
In light of these circumstances, the MS Chapter of TNC has developed and initiated a freshwater
conservation program focused on meeting the mission and conservation goal of TNC.
The Nature Conservancy’s Conservation Approach
In order to meet its ambitious mission, TNC has developed a strategic, science-based planning
process, called Conservation by Design (CBD), which helps identify the highest-priority places
that, if conserved, promise to ensure biodiversity over the long term. In other words, CBD
provides a framework for achieving meaningful, lasting conservation results. The MS Chapter f
TNC utilizes the process of CBD in its conservation efforts, including freshwater conservation.
Conservation by Design involves four main steps (Figure 1):

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Figure 1. Conservation by Design
¬ Step 1. Identify and Prioritize Conservation Areas
¬ Step 2. Develop a Conservation Area Plan for each Conservation Area
¬ Step 3. Implement the Conservation Area Plan
¬ Step 4. Perform Measures of Success to evaluate the progress of implementation
Conservation Areas
TNC
Data
Other
Data
Heritage
Data
Conservation Area Plan
Targets
Threats
Strategies
Measures of Success
Strategy
Implementation
Measure
Success

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Step 1. Identify and Prioritize Conservation Areas
The first step in CBD involves the identification and prioritization of areas of biodiversity
significance. Areas of biodiversity significance are those that if protected or restored the mission
and conservation goals of TNC will be met. Specifically, these biodiversity significant areas
contain rare, endemic or imperiled species, represent a wide range of natural and unique
biological communities, and/or are good examples of ecologically significant ecosystems.
The identification process involves gathering data and information, identifying potential
conservation target species, communities and systems, assessing the viability of the targets, and
developing portfolios of conservation areas using these data. Sources of data and information for
identifying portfolio conservation areas include TNC Ecoregional Planning Process, Natural
Heritage Programs, TNC’s Freshwater Initiative Program, government agencies, remote sensing
data warehouses, and regional expert workshops.
The prioritization process involves consideration of several priority factors, scoring these factors
for each portfolio area and ranking the areas according to their scores. The factors used to
prioritize portfolio areas are:
¬ Conservation value
¬ Viability of targets
¬ Severity and scope of threats
¬ Feasibility of implementation of strategies
The Mississippi Chapter of TNC has completed the identification of freshwater conservation
areas to be included in the MS Chapter’s portfolio of all conservation areas, both terrestrial and
aquatic (Table 3, Figure 2). In addition, these sites have been prioritized and the highest priority
areas for immediate focus are shown in Figure 3. It is important to note that the list of portfolio
sites is iterative and new sites may be added, current sites may be dropped and/or the priority of
sites may change as new data and information become available.
Step 2. Develop a Conservation Area Plan for each High Priority Conservation Area
Once conservation areas have been identified and prioritized, a plan for how to conserve or
protect the highest priority areas is developed. This plan is called a Conservation Area Plan
(CAP). The CAP is developed in partnership with other technical experts with knowledge of the
conservation area. The utilization of other experts in the development of the CAP is critical to
developing a sound and meaningful plan. The first step in developing a CAP for areas of high
priority is to gather and compile existing information and data specific to the area. Much of
these data will have been gathered during the identification of conservation areas, however, this
process will involve a much more comprehensive and detailed data search. Data to be gathered
include but are not limited to physical, chemical, biological, remotely sensed, location of point
and non-point sources of pollution, land use characteristics, and landowner information.

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Table 3. Freshwater Conservation Areas Identified for Mississippi
Conservation Area Name
Conservation Program Priority
Amite River
Central Mississippi
High
Bayou Pierre
Central Mississippi
High
Rodney Lake
Central Mississippi
High
Strong River
Central Mississippi
High
St. Catherine Creek
Central Mississippi
Medium
Bayou Sara
Central Mississippi
Low
Big Black River
Central Mississippi
Low
Clark Creek
Central Mississippi
Low
Lower Buffalo River
Central Mississippi
Low
Tallahaga/Noxapater Creeks
Central Mississippi
Low
Tangipohoa River
Central Mississippi
Low
Thompson Creek
Central Mississippi
Low
Upper Yockanookany
Central Mississippi
Low
Buttahatchee River
Northeast Mississippi
High
Hatchie River
Northeast Mississippi
High
Luxapalila/Yellow Creeks
Northeast Mississippi
High
Bull Mountain Creek
Northeast Mississippi
Medium
Noxubee River
Northeast Mississippi
Medium
Sucarnoochee River
Northeast Mississippi
Medium
Upper Wolf River
Northeast Mississippi
Medium
East Fork Tombigbee River
Northeast Mississippi
Low
Pickwick Lake
Northeast Mississippi
Low
Bay St. Louis
South Mississippi
High
Lower Pearl River
South Mississippi
High
Pascagoula River
South Mississippi
High
Tchoutacabouffa River
South Mississippi
Medium
Big Sunflower River
Yazoo Basin
High
Lower Yazoo River
Yazoo Basin
High
Indian Bayou
Yazoo Basin
Medium
Chewalla Creek
Yazoo Basin
Low
Hurricane Creek
Yazoo Basin
Low
Jenkin's Lake
Yazoo Basin
Low
Little Tallahatchie River
Yazoo Basin
Low
Otoucalofa Creek
Yazoo Basin
Low
Piney Creek
Yazoo Basin
Low
Puskus Creek
Yazoo Basin
Low
Taylor Creek
Yazoo Basin
Low
Toby Tubby Creek
Yazoo Basin
Low
Upper Yalobusha River/Shutispear
Yazoo Basin
Low

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Ê
Ú
Ê
Ú
80
0
80
160 Miles
N
E
W
S
Central MS Conservation Program
Northeast MS Conservation Program
Yazoo Basin Conservation Program
South MS Conservation Program
Lakes
Major Rivers
Freshwater Conservation Areas
Figure 2. Map of Freshwater Conservation Areas Identified for Mississippi

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Figure 3. Map of High Priority Freshwater Conservation Areas Identified for Mississippi
Ê
Ú
80
0
80
160 Miles
N
E
W
S
Bay St. Louis
Pascagoula River
Lower Pearl River
South MS Conservation Program
Hatchie River
Buttahatchee River
Luxapalila/Yellow Creeks
Northeast MS Conservation Program
Big Sunflower River
Lower Yazoo River
Yazoo Basin Conservation Program
Upper Amite River
Rodney Lake
Bayou Pierre
Central MS Conservation Program
Strong River
Major Rivers
Lakes

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The second step in the CAP process is to evaluate the compiled data and information to identify
conservation targets, and threats to those targets, with threats being defined as stresses and
sources of stress to the targets. Conservation targets include species that are imperiled,
endangered or of special concern, biological communities that are groupings of co-occurring
significant species, and ecological systems that are assemblages of communities occurring
together on the landscape and are linked by common environmental processes, regimes, or
gradients. Stresses are factors that may potentially degrade or negatively impact the targets
within the next ten years. Stresses may be those factors that directly impact the target or those
that indirectly impact the target by affecting important ecological processes that influence the
target. Examples of stresses include habitat disturbance, sedimentation, reduction of
connectivity, organic enrichment and nutrient enrichment. Sources of stress are anthropogenic
practices that are incompatible and result in the stress to the targets. Sources of stress include
active sources as well as historical sources. Examples of sources of stress include: incompatible
urban development, incompatible grazing practices, incompatible forestry practices, alteration of
channel morphology and/or hydrologic regime, and point source pollution discharges.
The third step in the CAP process is to develop strategies to abate the threats to the conservation
targets and to develop measures to evaluate the success of the conservation strategies. Strategies
that are identified are also ranked according to their benefits, feasibility and cost of
implementation. Following are some examples of strategies that have been used by TNC:
¬ Land Acquisition
¬ Conservation Easements
¬ Develop/Promote Watershed
Management Plans
¬ Provide Land Management Assistance
¬ Influence Public Policy/Planning
¬ Establish Water Management
Agreements
¬ Support/Promote Compatible
Development
¬ Support/Promote Sustainable Forestry
¬ Provide Wetland/Stream Mitigation
¬ Develop Regional Conservation
Alliances
¬ Support/Promote and Implement Best
Management Practices
The fourth step in the CAP process is to identify measures of success. Measuring the success of
conservation strategies can be difficult and expensive, and may involve establishing monitoring
programs. Ultimate success may take many years; therefore, surrogate measures of intermediate
success or milestones are also used. To evaluate the success of conservation strategies, one may
measure the condition of the conservation target, the persistence of the threats, or the progress of
the strategy. In addition, one may employ the use of surrogate measures of overall ecological
integrity of the system of which the target is a part. Following are examples of measures of
success that have been used by TNC:
¬ Target specific measures: population status and trends, species surveys
¬ Ecological System measures: using Indices of Biological Integrity as indicators of community
health, geomorphic status indicators, and habitat quality indicators
¬ Threat abatement measures: BMPs, miles of riparian buffer, sediment loads

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Step 3. Implement the Conservation Area Plan
This is the natural next step upon completion of the CAP. Strategy implementation occurs based
on the ranking of strategies, as outlined in the CAP, and available funding and resources.
Strategy implementation is enhanced by the use of partnerships with other agencies and groups
committed to the same mission and goals. In addition, TNC’s experience indicates that long-
term ecosystem conservation will succeed only with strong support from the people who live and
work in these places. Therefore, TNC strives to build strong community support during the
implementation phase of the process.
Step 4. Perform Measures of Success to evaluate the progress of implementation
The Nature Conservancy has defined conservation success as making substantial progress
towards the long-term abatement of critical threats and the sustained maintenance or
enhancement of biodiversity health at conservation areas. The two core measures of success
involve measuring biodiversity health and threat status and abatement. There is often a lag-time
between implementation of threat abatement strategies and abatement of the threat, and an even
longer lag-time between strategy implementation and showing changes in biodiversity health.
Therefore, TNC has developed a set of short-term indicators that reflect our capacity to
implement effective strategies and enhance or maintain the conservation targets.
Status of Conservation Efforts at Mississippi’s Highest Priority Freshwater Conservation
Areas
The MS Chapter of TNC has been actively engaged in conservation efforts in the Pascagoula
watershed long before a state chapter even existed. Subsequently, we have been most successful
through Conservation by Design in this conservation area. To date we have completed the first
iteration of the CAP for the Pascagoula watershed and are actively engaged in strategy
implementation. We are also continuing to refine the conservation targets, threats and strategies.
With the recent addition of a Program Director for the Northeast Mississippi Conservation
Program, we have initiated freshwater conservation efforts in the Luxapalila and Buttahatchee
River conservation areas. For these areas and the other high priority conservation areas, we are
in the beginning stages of data and information gathering, CAP development and strategy
implementation.
Example of Conservation Efforts in the Pascagoula Watershed
The Pascagoula River is the largest river with an unimpeded main stem channel in the lower 48
states and represents one of the finest natural areas remaining in Mississippi (Figure 4). It
contains a long, mostly contiguous block of bottomland hardwood forest and coastal marsh. The
Pascagoula River and the Ward Bayou Wildlife Management Areas (over 50,000 acres of
conservation land) include about fifty miles of frontage along the Pascagoula River that consists

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Figure 4. Pascagoula River Watershed
of sandbars, low ridges, high flats, low flats and over fifty oxbow lakes. The Coastal Preserve
System includes over 11,000 acres in the Pascagoula and Escatawpa marshes, of which TNC has
bought or protected 4,500 acres. The Nature Conservancy has been actively engaged with
conservation on the Pascagoula beginning with the original state acquisitions in the early 1970s.
In 1999 a 3300-acre preserve at the confluence of the Leaf and Chickasawhay Rivers was
purchased and dedicated in honor of Charles Deaton. In 2002, a 1700-acre preserve adjacent to
the Deaton preserve was purchased and dedicated in honor of Herman Murrah.
Through the development of the first iteration of a CAP for the Pascagoula River the following
conservation targets have been identified:
¬ Resident Riverine Aquatic Alliance
¬ Anadromous Fish
¬ Emergent Marsh Complex
¬ Seagrass Beds
¬ Bottomland Hardwood Forest Complex
¬ Swallow tailed Kite
¬ Longleaf Sandhill Matrix
While about fifty miles of the river corridor is already protected by the State or by The Nature

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Conservancy, several high threats to conservation targets exist and require immediate action.
The following threats have been identified for the Pascagoula River during the development of
the CAP:
¬ Sedimentation
¬ Alteration to Hydrologic Regime
¬ Land Conversion and Forest
Fragmentation
¬ Point Source Pollution
¬ Exotic Invasive Species
¬ Alteration of Fire Regimes
The MS Chapter of TNC has identified and engaged in several strategies to abate critical threats
facing the Pascagoula River Watershed. Some of the higher priority strategies include:
¬ Collaborate with MDEQ’s Basin Management Approach
¬ Establish and Support a Pascagoula River Basin Alliance
¬ Acquire Lands Along the Pascagoula River and its Major Tributaries
¬ Form a South MS Prescribed Fire Council
¬ Further the Scientific Knowledge and Understanding of the Pascagoula Watershed
Water withdrawal projects and proposed reservoirs require The Nature Conservancy to engage
with community-based strategies and to acquire hydrologic expertise in order to abate these
threats. In addition, there is a need to work with industry, particularly the shipbuilding industry,
to diminish toxins in the river. Education and compatible economic development are
community-based strategies that can affect best practices by industry.
One issue of important concern, that will require a creative strategy is the increase in the amount
of sediment entering streams and rivers in the Pascagoula, as well as the issue of in-stream
sedimentation caused by scouring of the bed and bank erosion. The building of roads at an
unprecedented rate creates sedimentation concerns as well as interrupting hydrologic flow.
Incompatible silviculture practices are also a major source of sedimentation. Gravel mining,
sedimentation and alterations to hydrologic regime are major threats to the migration and
spawning habits of Gulf Sturgeon, Pearl Darter and Alabama Shad.
By following through with implementation of identified strategies, the MS Chapter of TNC is
involved in several projects in the Pascagoula Watershed.
A Coastal Impact Assistance Program (CIAP) funded collaboration between TNC, MDEQ,
Jackson County and George County has led to the Upper Pascagoula Connector Project. In
addition, the MS Chapter of TNC has initiated a Lower Pascagoula Connector Project. The goal
of these projects is to connect the eastern riverfront side of the Upper Pascagoula with the Deaton
Preserve, to connect the western side of the Upper Pascagoula protected lands with the Desoto
National Forest and to connect the lower portion of the Pascagoula Protected Lands with the
Coastal Preserves (Figure 5).

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Figure 5. The Upper and Lower Pascagoula Connector Projects

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Another CIAP funded collaboration between TNC, MDEQ, Jackson and George Counties, the
Coastal Preserves and Audubon MS has led to the Pascagoula River Ecotourism Study. This
study will hopefully provide sound data and information to foster the utilization of ecotourism as
a successful strategy that will promote environmental protection and restoration, while at the
same time, provide a boost to the economy of the area.
Collaboration between TNC, George County Economic Development Foundation, the Lucedale
Garden Club and Audubon MS has led to the holding of an annual Migration Discovery Day in
George County, MS. This is another example of where TNC and its partners hope to build
positive awareness of the ecological significance of this area by engaging the public in positive
interaction with the ecosystem.
A Nature Trail and Observatory are being developed along the Escatawpa River in Jackson
County, MS. The nature trail and observatory will be located in the Grand Bay Wildlife Refuge,
at the Mississippi Welcome Center on Interstate 10. The objective of this project is to capitalize
on the heavy traffic along this major interstate to attract visitors to view the beautiful and pristine
ecosystem of this area to hopefully promote awareness of the significance of the Escatawpa River
and its surrounding landscape.
Finally, TNC is partnered with the Pat Harrison Waterway District, U.S. Army Corps of
Engineers and the U.S. Geological Survey to conduct a geomorphic assessment of the Pascagoula
River System. Dr. Joann Mossa, from the Department of Geology at the University of Florida is
conducting the study for the purposes of gaining an understanding of the current geomorphic
state of the Pascagoula River and to understand the causes and effects of accelerated erosion
within the watershed. The results of this study will facilitate a better understanding of the
physical and hydrological characteristics of the Pascagoula River so that better and more sound
assessments can be made regarding the threats to the system and appropriate strategies can be
developed. In addition, these results will provide sound scientific data for decision and policy
makers and will hopefully help guide decisions regarding the future uses of the resources and the
management of the Pascagoula River Watershed.
Summary
The southeastern United States contains a rich diversity of freshwater species, communities and
ecosystems. In particular, Mississippi contains a rich diversity of aquatic plants and animals
throughout its many watersheds. Certain incompatible human uses of Mississippi's natural resources
pose threats to this natural heritage, resulting in an increasing need for efforts to protect water
quality, quantity and biodiversity within the State. Limited resources, however, require these efforts
be carefully planned and focused to increase the probability of successful conservation and thus have
a positive impact on aquatic natural resources. Through a process called Conservation by Design,
freshwater conservation areas of biodiversity significance have been identified and prioritized and
the development of plans to conserve and or protect these areas is underway. The next steps for MS
TNC will be to implement these conservation plans, measure the success of conservation efforts and
continue to revise the conservation plans as data and information become available. Key factors in
the success of the conservation of Mississippi’s freshwaters are to engage the community in

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conservation planning and the implementation of conservation strategies, to educate the citizens and
policy makers of the State as to the importance and significance of freshwater biodiversity and
conservation, to form partnerships with private, public and non-profit organizations to complement
and enable resources to achieve common objectives, to use scientific data as the foundation of
conservation planning and to identify and secure adequate funding for conservation activities.
References
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species. New York: Random House.
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Master, L.L., S.R. Flack, and B.A. Stein, eds. 1998. Rivers of life: Critical watersheds for
protecting freshwater biodiversity. The Nature Conservancy, Arlington, VA.
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